Would it be possible for you to provide allele numbers for all sites for each separate ancestry group? I was only able to find the total count in your data.
Allele numbers for all sites for each genetic ancestry group are available in our Hail Tables on the Downloads page. “AN” consists of an array of allele numbers for each group, with the order of the groups defined in the “strata_meta” global. For example, the allele number for the ‘afr’ genetic ancestry group is the third element of the array.
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